FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495347
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24790.5004572552170499No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT19490.3934615532142115No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG18050.36439102285872327No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT10600.21399140400567684No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC10560.21318388927357995No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA9900.1998598961939812No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC8590.1734137887178079No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7500.15140901226816755No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAGCC7390.1491883467549011No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCGCG6780.13687374709042346No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)