FastQCFastQC Report
Wed 31 May 2023
EGAF00007930203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences485191
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25070.5167037311079554No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT13040.26876013776018104No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG11900.24526423614617746No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT10430.21496688932812025No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC8960.18466954251006304No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAACAC7990.16467741569814776No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC6430.132525129278985No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT5960.12283822247321158No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5210.1073803924639987No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC5190.10696818366375303No Hit
CGCGAAATGATCCGTTATATGGCACTGGTTTCC5040.10387661766191045No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC4900.10099115606019071No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)