FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences490113
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24750.5049855849569385No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT13260.2705498527890507No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG11930.24341325367823338No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT10030.20464668351992293No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC8640.17628587693042216No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAACAC8530.1740414965528358No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC6890.14057982546882045No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT6430.13119423479891373No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC5360.10936253476239154No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5320.1085463964432692No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG5130.10466973942743817No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)