FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930211

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930211
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465564
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22370.4804924779407343No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT14710.31596085607993746No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG11760.25259685027192824No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG10360.22252579666812727No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC8910.19138077686419053No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC8620.1851517729034032No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT8210.17634525006229004No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC7510.16130972326038956No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA7350.15787303141995515No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC6120.13145346289661572No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACCAC5410.11620314285468807No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5370.11534396989457947No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5280.11341083073433512No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC5220.11212207129417225No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT5100.10954455241384645No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCGGT4880.10481910113324913No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGAGC4750.10202678901289619No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)