FastQCFastQC Report
Sun 21 May 2023
EGAF00007930224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences537737
Sequences flagged as poor quality0
Sequence length41
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT15150.28173623909085665No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGG8930.16606631122649176No Hit
GGCGATCAGGTCGGACAGGTTTTTCTTGATAACTTCGCCAG8540.15881369517068755No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCA8430.15676808551392224No Hit
GCCTGCGGTCTGGCCGTTCGCGGCTTCATAAGACCAGGACC8190.15230493717188887No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTA8140.1513751146006319No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATAT8060.14988739848662078No Hit
GTCCACAATTTTGCTCGCAGCAGATGGGTCGGCGATTTTAT7680.14282074694506794No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAG7240.13463830831800674No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGAT6380.11864536009238717No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCC6280.11678571494987326No Hit
ACGCACCAGACCCTGTTTCAGCACCTGGTCAATGCGCTCCT6180.11492606980735935No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTAC6070.11288046015059407No Hit
GGCCTGTTCCTGGTTGGTAATGGACTGCGGAGTTTCGACTT5750.10692959569454956No Hit
AGAGGACGGACGGCTACCCTGTTTGCCGTTCCAGTAGGCCT5680.10562784409478983No Hit
ACCCGGAGACTGCGGCAGCGTATCACGGGTGCCGTCGCCAC5490.10209451832401341No Hit
GCTCAGCTGAGACGGCTGCATGTTTTTGCCGGCCAGGTGTG5410.10060680221000229No Hit

[OK]Adapter Content

Adapter graph