FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930237

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930237
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences544604
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28510.5234996437778643No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18780.3448377169466254No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14280.2622088710328973No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7910.14524314915057546No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6930.12724842270714132No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6160.11310970907301451No Hit
GACGCTAACGGCAACAACCTGACTTTCGAAC5890.10815197831819084No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)