FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930241

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930241
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511442
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG85891.6793693126493328No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9490.18555378713519813No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7660.14977260373610302No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6330.12376769995424701No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5230.10225988479632099No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)