FastQCFastQC Report
Sun 21 May 2023
EGAF00007930243

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930243
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences553087
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18920.34207999826428753No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10630.19219399479647867No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8300.1500668068495553No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6280.11354452373677199No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6140.11101327639232164No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5680.10269632083198485No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)