FastQCFastQC Report
Wed 31 May 2023
EGAF00007930251

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930251
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences540651
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG81711.511326160499102No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT69891.292700836584044No Hit
ATGTCCAACATGGACATCGATGGTATTAACA28400.5252926564456554No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15890.29390494052540367No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC14080.2604267817871418No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC13920.25746738653956064No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11880.21973509713290088No Hit
GATGTCCAGTCTGGTGCGATCGTTGAACCGG10110.18699678720653434No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8520.1575877969336966No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8120.1501893088147437No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8010.14815472458203166No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7790.14408555611660756No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7700.14242089628984317No Hit
ATGGCACGTCGCCTGCCGAAACCGACTCTGC7650.14149608527497406No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC7630.14112616086902643No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG7410.13705699240360233No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC6300.11652618787350805No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA6150.11375175482890071No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6100.1128269438140316No Hit
CACACCGCATACGCGAACTCTATCGATGGCA5910.10931266195752898No Hit
CGCGAAATTATGAAACGTGACTTTCCGACCG5800.10727807772481694No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC5710.10561341789805254No Hit

[OK]Adapter Content

Adapter graph