FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences535739
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT14240.2658010710439225No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT7750.14465999301898871No Hit
GCGACGTTCCTGAGAAGAAGTCGGGACACCCTGAGGCGGTGGCG6290.11740791691476633No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA5560.10378187886265515No Hit
CAGAGACTGCTGCGCGGACACCATCGCAGCCGGTGCGACGGCGT5460.10191529830757141No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)