FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930261

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930261
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences528695
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG90271.7074116456558128No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20550.3886929136836929No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA12180.23037857365778No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7800.14753307672665714No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5520.1044080235296343No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5410.1023274288578481No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)