FastQCFastQC Report
Wed 31 May 2023
EGAF00007930271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences488211
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG17740.3633674784058532No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10910.22346895092490746No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8680.17779197928764406No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7760.15894766811890762No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6270.12842807720432353No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5570.1140900143585458No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)