FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences480721
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG71031.4775722300461183No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24370.5069468569086851No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCT19410.4037685060565276No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG15790.3284649516039449No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG13560.28207629789420474No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8920.18555461483896063No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG8340.17348940445705513No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT6060.12606064640404727No Hit
ATTGCTGCCGTTGGCTCTCCAGTGAAGTCTA6010.12502054206077953No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT5960.12398043771751181No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAG5790.12044408295040158No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG5050.10505053867003937No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)