FastQCFastQC Report
Sun 21 May 2023
EGAF00007930287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences499515
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28920.5789615927449626No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23230.46505109956657953No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12120.24263535629560673No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7980.15975496231344405No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT7090.1419376795491627No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7060.14133709698407454No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6450.12912525149394913No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6080.1217180665245288No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)