FastQCFastQC Report
Sun 21 May 2023
EGAF00007930291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences428111
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60811.420426011011163No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8620.20134964997395535No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8380.19574362723686145No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7190.1679470978321043No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6830.15953806372646348No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5210.12169741025107973No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5020.11725930891754709No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4910.11468988182971238No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)