FastQCFastQC Report
Wed 31 May 2023
EGAF00007930315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences490873
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30600.6233791632458905No Hit
CGTCGCGGTCAGAAAGCCAAATCTAACCCGA15950.32493129587490044No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10100.20575586760730372No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7790.15869685234266298No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)