FastQCFastQC Report
Wed 31 May 2023
EGAF00007930323

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930323
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450141
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7990.17749993890803104No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7620.16928029217511847No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6400.14217767321794728No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5890.1308478898833921No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5630.12507192190891298No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5220.11596366471838823No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4620.10263450785420569No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)