FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454020
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT8110.17862649222501212No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC6490.14294524470287653No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT6350.13986168010219815No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)