FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930325

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930325
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454020
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA8230.18126954759702216No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8070.1777454737676754No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6480.14272499008854236No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6180.13611735165851724No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5440.11981851019778865No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4890.10770450640940929No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)