FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007930327

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930327
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences428126
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21100.49284556415634645No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12090.2823935009786839No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9440.2204958353381948No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9310.21745934608035952No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7390.17261273550309955No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6880.1607003545685149No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5700.13313837515124052No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5660.13220407076421428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)