FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930329

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930329
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences436420
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19840.4546079464735805No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12870.29489940882635995No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10230.23440722240043993No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9270.21241006370010543No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7050.1615416342055818No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6940.15902112643783511No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6120.14023188671463271No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5500.1260253883873333No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)