FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences435350
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT34260.7869530263006775No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13850.3181348340415757No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8400.1929482025956127No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7970.18307109222464685No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5000.11485012059262661No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5000.11485012059262661No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)