FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464505
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46501.0010656505312105No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9920.21356067211332494No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG8850.1905253980043272No Hit
ATGTCCAACATGGACATCGATGGTATTAACA7250.1560801283086296No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG6780.14596183033551846No Hit
CCGGCCGTGGCACCAACCAGCGCTGCCTCCC5070.10914844834824168No Hit
GCACCGACCTCCGCGGCGAGCCGTAAACCAG4950.10656505312106436No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)