FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930371

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930371
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences444178
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22560.5079044887410002No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20420.45972560550049757No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6710.1510655638055014No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5940.133730171237657No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4510.10153587075451734No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)