FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930387

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930387
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463890
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT43330.9340576429757055No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT24240.5225376705684537No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23870.5145616417685227No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA13800.29748431740283254No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC11740.25307723813835176No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT8410.1812929789389726No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG7560.16296966953372566No Hit
GATGTCCAGTCTGGTGCGATCGTTGAACCGG6030.12998771260428119No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5680.12244282049623832No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT5080.10950871973959345No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)