FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930419

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930419
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences405083
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG33740.8329157234443312No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9590.23674160604123104No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9180.22662022350974984No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7710.19033136418956115No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG5980.1476240671664819No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4620.11405070072059305No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4510.11133520784629324No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)