FastQCFastQC Report
Sun 21 May 2023
EGAF00007930423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences525676
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14600.27773761784825635No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13240.25186616851444615No Hit
ATGTGCGAAGACACCATCACCTACGAATGTC10740.20430835723905977No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8270.15732123969897807No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6760.1285963216886447No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5560.10576857227645926No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)