FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500526
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41370.8265304899245993No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11200.22376459964117745No Hit
ATGTGCGAAGACACCATCACCTACGAATGTC9860.19699276361267948No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8220.1642272329509356No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6340.1266667465825951No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)