FastQCFastQC Report
Sun 21 May 2023
EGAF00007930429

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930429
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences498530
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42340.8492969329829699No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16750.3359878041441839No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14310.28704390909273264No Hit
TCTGGCTACGAAATTGACCACATCGACCTGG10800.21663691252281708No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8720.17491424788879306No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7740.15525645397468557No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5720.11473732774356607No Hit
GGTCAGAAAGGTGGCGCGCAGAAGTCCCAGA5180.10390548211742523No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)