FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478103
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40950.8565099988914523No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18330.38339018997998336No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8070.16879208036761953No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8050.16837376046584104No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7860.1643997213989454No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA7200.15059516464025535No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7130.14913104498403063No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6120.12800588994421705No Hit
AAAAACGTAAAACACGACTCCTTCAGCGGCA5240.10959981426596362No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5130.10729905480618193No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)