FastQCFastQC Report
Sun 21 May 2023
EGAF00007930439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences511531
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT61241.197190395108019No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45370.8869452682242133No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA19450.38023111013799754No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17350.3391778797374939No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC13250.25902633466984404No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC11590.22657473349611262No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT9650.18864936826898077No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9130.17848380645552275No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC8850.17301004240212225No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7850.15346088506854913No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7490.14642318842846277No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC7090.13860352549503355No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6830.1335207445883045No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6420.12550559008153953No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGG6130.11983633445480331No Hit
GGTGACGTTGCTAAAGCGATCAATGACGCGG5850.11436257040140284No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5600.10947528106800956No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5430.10615192432130213No Hit
ATGGGTGCAGACATGGTAGAACTGGACATTC5290.10341504229460188No Hit
GCTTCCGAACCGGAGGACAAATCTCCGCGCG5140.10048266869456592No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5140.10048266869456592No Hit

[OK]Adapter Content

Adapter graph