FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007930455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences428750
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT29540.6889795918367347No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21570.5030903790087464No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14920.34798833819241987No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7230.16862973760932945No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6390.14903790087463556No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6360.14833819241982507No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6140.1432069970845481No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5540.1292128279883382No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4780.1114868804664723No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4460.10402332361516035No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)