FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930457

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930457
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences411768
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43471.0556915544675642No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT28370.6889802024440947No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14110.3426686872219308No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6530.15858444561014942No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6050.14692739600940335No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5940.14425598880923238No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5470.13284179440850188No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4810.11681335120747606No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4320.10491344640671448No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4320.10491344640671448No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)