FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences453915
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG37640.8292301422072413No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27710.6104667173369464No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC25180.5547294096912417No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG16850.37121487503166894No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG15770.3474218741394314No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA15200.33486445700186157No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT13570.29895465009968825No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA13240.2916845664937268No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG11430.2518092594428472No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC10550.23242236982694997No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC10520.23176145313549895No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG9910.21832281374266105No Hit
CGCCGTCCGCCACCTGGTCGTCGCCCGTTCT6980.1537732835442759No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT6930.15267175572519084No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6550.1443001443001443No Hit
GAACAGGGCCCGGCGGACGACCCGGGTGAGG6470.14253769978960817No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC6320.13923311633235297No Hit
TCCCCGCCTCGTCGCCCGCCGCCGGGTCGTC6250.13769097738563388No Hit
CCGGTAGGCGAAGCAGACTACTTCGAGTATC6190.13636914400273178No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5910.1302005882158554No Hit
CCTGTAGGTGAAGCGGACTACTTCGAGTATC5360.1180837822059196No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4620.10178117048346055No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA4560.10045933710055847No Hit

[OK]Adapter Content

Adapter graph