FastQCFastQC Report
Wed 31 May 2023
EGAF00007930553

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930553
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences361617
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT33280.9203107154807435No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31760.8782772933794595No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC18610.5146328850690095No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC12850.3553483381588808No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA11780.32575902128495066No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG11310.3127618447141589No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG11300.31248530904243993No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10700.2958931687393015No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG9810.2712814939563129No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT8840.24445753379957247No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7080.19578725557703314No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC7050.19495764856187625No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7040.19468111289015727No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG6830.18887386378405882No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6170.17062250945060659No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC4400.1216756955563483No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT4150.11476230376337396No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4090.11310308973306012No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG4040.11172041137446524No Hit
GAGAAAACGAAACAGACTCTGGCTTCTGTTT3980.1100611973441514No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA3830.1059131622683668No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG3810.10536009092492885No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG3740.10342434122289604No Hit
GTGGGCGGCTCTGATGCACAGAACACCTCTA3700.10231819853602016No Hit

[OK]Adapter Content

Adapter graph