FastQCFastQC Report
Sun 21 May 2023
EGAF00007930557

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930557
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences430168
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG36880.8573394580721951No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24400.567220248833014No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC16550.3847334064830485No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13870.32243216603745517No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT11150.25920105633147983No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG10100.23479198824645253No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA9780.2273530341633966No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG9290.21596213572371725No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG9050.2103829201614253No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG8470.19689981588588645No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG8030.18667125402168455No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA7590.17644269215748265No Hit
CTGATGCGTATGAAGGAAGTATCTAGCGTTT7350.17086347659519072No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG6830.15877517621022483No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6690.1555206337988879No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6480.15063882018188243No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC6250.14529207193468596No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG6240.1450596046195905No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG6040.14041025831768053No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5980.13901545442710755No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG5850.13599337933086608No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5190.12065053653456323No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5170.12018560190437223No Hit
CCGGCCGTGGCACCAACCAGCGCTGCCTCCC4400.10228561864201893No Hit

[OK]Adapter Content

Adapter graph