FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930563

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930563
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences428646
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA14360.33500837520938026No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8270.19293309630790909No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7720.18010199558610135No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5650.13181039832402497No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5140.11991246856380322No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4310.10054917111089337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)