FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478941
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67951.4187551285022582No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22690.4737535521076709No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC11840.24721207831444794No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11740.24512413846381914No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11470.2394867008671214No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG11370.23739876101649265No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG11360.23718996703142978No Hit
GCTTGGGCGCTGAAAAACCCGCACCTGGCAT9480.19793669783960866No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG8470.1768485053482579No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTC8250.17225503767687458No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7800.16285930834904508No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7490.15638669481209586No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG7400.15450754894652993No Hit
ATTGCTGCCGTTGGCTCTCCAGTGAAGTCTA7180.14991408127514663No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG6380.13321056247011634No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG6040.12611156697797848No Hit
CGCCTGGACGCAGAACAGCGCGCCCAGCAGA5750.12005654141115502No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5650.11796860156052624No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5480.11441910381445732No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5320.11107840005345126No Hit

[OK]Adapter Content

Adapter graph