FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475583
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29140.612721649007639No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17790.37406719752388123No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG14290.30047331380642284No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9300.1955494624492465No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8680.18251283161929674No Hit
CAGCGCGGTGATCCGTTCGACAAAAACTACG5490.11543726331681325No Hit
GCGAAAACTGCGGCGGCCAAACCGGCTGCCA4990.10492385135717636No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)