FastQCFastQC Report
Sun 21 May 2023
EGAF00007930589

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930589
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences473368
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG68781.4529921752209696No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA22400.47320477936827166No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA10910.23047607780838586No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9770.2063933345726792No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8730.184423112673438No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6420.13562386980108498No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG4930.10414730188774907No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4760.10055601561575772No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)