FastQCFastQC Report
Wed 31 May 2023
EGAF00007930601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481489
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30830.6403053860005109No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8310.1725896126391257No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7940.16490511725086138No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7210.14974381553888041No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6930.14392852173154527No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5190.10779062450024818No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4930.10239070882200839No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)