FastQCFastQC Report
Wed 31 May 2023
EGAF00007930603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446685
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64931.4535970538522673No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7860.17596292689479165No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7670.17170937013779283No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6580.14730738663711562No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6220.13924801593964425No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5470.12245766031991223No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)