FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930605

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930605
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464149
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64751.3950261661664682No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14860.32015581203449756No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10800.23268390107487033No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6100.1314233144959916No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)