FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504067
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG32640.6475329668476612No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8020.1591058331531324No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7820.15513810664058547No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5940.11784147742264421No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG5090.1009786397443197No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)