FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474480
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA34170.7201568032372281No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29640.6246838644410723No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16280.3431124599561625No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA15880.33468217838475806No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA14110.2973781824312932No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG7060.14879446973528915No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6190.1304586073174844No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5990.12624346653178217No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5970.12582195245321195No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG5950.1254004383746417No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)