FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930653

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930653
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517251
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT32200.622521754428701No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31820.6151752244074927No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG12310.237988906739668No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11730.22677578197045534No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10420.20144958637102686No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTC8430.1629769686283835No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG7840.15157051412177067No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC6020.11638450191493105No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5960.11522452349052974No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5270.10188477160991473No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)