FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930697

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930697
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457651
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67441.473611988174395No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10090.22047367972538026No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8580.18747910525706268No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8220.1796128490924307No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8190.17895732774537804No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7170.15666960194558735No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5320.11624578554400623No Hit
GAAACCACTATCGCAGATAATAGCAAACGCT5050.11034609342053224No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4680.102261330140216No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)