FastQCFastQC Report
Sun 21 May 2023
EGAF00007930739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429416
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11520.26827132663897013No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5760.13413566331948507No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5100.11876595189746074No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4520.10525923579931815No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)