FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences424336
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9660.22764978696127597No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8860.20879680253384109No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7750.18263828664077522No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4920.11594585422872442No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4700.11076128351117984No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)