FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences438245
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT10410.23753836324430397No Hit
ACCTGCGGAGGTAACGTTGTTGTTGGTTTTCGGAGCGGTGGTGT9500.21677372246118037No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT8930.20376729911350958No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA8700.19851909320129152No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA7610.17364716083469292No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT7390.1686271377882235No Hit
AGCGGAAGAGCCGAACAGGCGACGGCTTGCACCTGGTTTGCGGG7330.1672580405937318No Hit
CTGGACGGAAACAGAACGACGGCTACGTTTGGAGTGGCGGGTAC5950.1357688051204235No Hit
GTTGCGCGGCGGACGAGTACGTACCGGAACGCGCAGACCGCTCA5630.12846695341646794No Hit
GCCATCAGCGCCCATGTCGGCGATCAGACGGATGTCACGTGCCT5390.12299056463850129No Hit
TGCACGTTCCGGAGACGGGTTACGGGTGCGTTTGTTAGACGGCG5090.11614507866604296No Hit
TGGTGCCTGAGACTCGTTCAGTTTCTTAGCTTCGCCCAGGACGT4400.10040046092938881No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)